Integrated Deep Learning and Stochastic Models for Accurate Segmentation of Lung Nodules from Computed Tomography Images: A Novel Framework

dc.contributor.authorE. Youssef,Bassant
dc.contributor.authorAlksas, Ahmed
dc.contributor.authorShalaby,Ahmed
dc.contributor.authorH. Mahmoud, Ali
dc.contributor.authorVan Bogaert,Eric
dc.contributor.authorSaleh Alghamdi,Norah
dc.contributor.authorNeubacher, Alyssa
dc.contributor.authorContractor,Sohail
dc.contributor.authorGhazal, Mohammed
dc.contributor.authorS. Elmaghraby, Adel
dc.contributor.authorEl-Baz, Ayman
dc.date.accessioned2024-04-29T06:00:33Z
dc.date.available2024-04-29T06:00:33Z
dc.date.issued2023-09-08
dc.description.abstractThis paper introduces an innovative model for precise extraction of lung nodules from 3D computed tomography (CT) scans. Our approach comprises two essential preprocessing stages aimed at refining search accuracy and nodule segmentation. Initially, we leverage a two-level joint Markov-Gibbs random field (MGRF) model to delineate the lung region, effectively distinguishing lung wall nodules from the chest region with shared visual characteristics. Subsequently, employing a deep learning U-net technique, we pinpoint the region of interest (ROI) housing the lung nodule, minimizing the inclusion of surrounding lung tissues. Further enhancement comes from a 3D U-net, trained with a novel loss function to mitigate under- or over-segmentation issues. The resulting segmentation robustly outlines lung nodules in terms of morphology and volume metrics, validated by Dice coefficient (DCE), absolute volume difference (AVD), 95th -percentile Hausdorff distance (HD), sensitivity, and specificity metrics. To assess our approach, we conducted comprehensive experiments. Our evaluation encompasses in vivo data from 50 patients and employs 679 subjects from the publicly available dataset of the Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI). The LIDC-IDRI dataset, a seminal resource for computer-aided diagnosis (CAD) in lung nodules, offers annotations enabling tasks like detection, segmentation, classification, and quantification. Our experiments showcase our model’s superiority over existing deep learning methods, particularly evident in metrics such as the 95th -percentile HD and DCE. While limited demographic information constrains a comprehensive analysis, our approach’s robust performance underlines its potential integration into nodule assessment AI systems. Keywords: Lung, Image Segmentation, Computed Tomography, Three-dimensional Displays, Deformable Models, Deep Learning
dc.identifier.citationYoussef, B. E., Alksas, A., Shalaby, A., Mahmoud, A. H., Van Bogaert, E., Alghamdi, N. S., ... & El-Baz, A. (2023). Integrated deep learning and stochastic models for accurate segmentation of lung nodules from computed tomography images: a novel framework. IEEE Access, 11, 99807-99821.
dc.identifier.doihttps://doi.org/10.1109/ACCESS.2023.3313174
dc.identifier.urihttps://dspace.adu.ac.ae/handle/1/5248
dc.language.isoen
dc.publisherIEEE Xplore
dc.titleIntegrated Deep Learning and Stochastic Models for Accurate Segmentation of Lung Nodules from Computed Tomography Images: A Novel Framework
dc.typeArticle

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